Serialized Form

Package biopb.image

Class biopb.image.Arg

class Arg extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

kind_

Object kind_

kindCase_

int kindCase_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.image.BinData

class BinData extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

data_

com.google.protobuf.ByteString data_

endianness_

int endianness_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.image.Call

class Call extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

args_

com.google.protobuf.MapField<String,Arg> args_

memoizedIsInitialized

byte memoizedIsInitialized

op_

Object op_

Class biopb.image.Ellipse

class Ellipse extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bitField0_

int bitField0_

center_

Point center_

memoizedIsInitialized

byte memoizedIsInitialized

radius_

Point radius_

rotation_

float rotation_

Class biopb.image.Event

class Event extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

outputs_

com.google.protobuf.MapField<String,Arg> outputs_

progress_

Object progress_

Class biopb.image.ImageAnnotation

class ImageAnnotation extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

annotation_

Object annotation_

memoizedIsInitialized

byte memoizedIsInitialized

pixelsSizes_

com.google.protobuf.Internal.FloatList pixelsSizes_

pixelsSizesMemoizedSerializedSize

int pixelsSizesMemoizedSerializedSize

rois_

List<ROI> rois_

Class biopb.image.ImageData

class ImageData extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bitField0_

int bitField0_

data_

Object data_

dataCase_

int dataCase_

imageAnnotation_

ImageAnnotation imageAnnotation_

memoizedIsInitialized

byte memoizedIsInitialized

pixels_

Pixels pixels_

Class biopb.image.Mask

class Mask extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

binData_

BinData binData_

bitField0_

int bitField0_

memoizedIsInitialized

byte memoizedIsInitialized

rectangle_

Rectangle rectangle_

Class biopb.image.Mesh

class Mesh extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

faces_

List<Mesh.Face> faces_

memoizedIsInitialized

byte memoizedIsInitialized

verts_

List<Point> verts_

Class biopb.image.Mesh.Face

class Face extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

normals_

List<Point> normals_

p1_

int p1_

p2_

int p2_

p3_

int p3_

values_

com.google.protobuf.Internal.FloatList values_

valuesMemoizedSerializedSize

int valuesMemoizedSerializedSize

Class biopb.image.OpInfo

class OpInfo extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

description_

Object description_

input_

int input_

kwargs_

Object kwargs_

labels_

com.google.protobuf.LazyStringArrayList labels_

memoizedIsInitialized

byte memoizedIsInitialized

name_

Object name_

streaming_

boolean streaming_

tensors_

com.google.protobuf.MapField<String,TensorArg> tensors_

Class biopb.image.OpList

class OpList extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

fingerprint_

Object fingerprint_

memoizedIsInitialized

byte memoizedIsInitialized

ops_

List<OpInfo> ops_

Class biopb.image.Pixels

class Pixels extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bindata_

BinData bindata_

bitField0_

int bitField0_

dimensionOrder_

Object dimensionOrder_

dtype_

Object dtype_

memoizedIsInitialized

byte memoizedIsInitialized

offsetC_

int offsetC_

offsetT_

int offsetT_

offsetX_

int offsetX_

offsetY_

int offsetY_

offsetZ_

int offsetZ_

physicalSizeUnit_

Object physicalSizeUnit_

physicalSizeX_

float physicalSizeX_

physicalSizeY_

float physicalSizeY_

physicalSizeZ_

float physicalSizeZ_

sizeC_

int sizeC_

sizeT_

int sizeT_

sizeX_

int sizeX_

sizeY_

int sizeY_

sizeZ_

int sizeZ_

timeIncrement_

float timeIncrement_

timeIncrementUnit_

Object timeIncrementUnit_

Class biopb.image.Point

class Point extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bitField0_

int bitField0_

memoizedIsInitialized

byte memoizedIsInitialized

x_

float x_

y_

float y_

z_

float z_

Class biopb.image.Polygon

class Polygon extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

points_

List<Point> points_

Class biopb.image.Polyline

class Polyline extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

points_

List<Point> points_

width_

float width_

Class biopb.image.Rectangle

class Rectangle extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bitField0_

int bitField0_

bottomRight_

Point bottomRight_

memoizedIsInitialized

byte memoizedIsInitialized

topLeft_

Point topLeft_

Class biopb.image.ROI

class ROI extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

shape_

Object shape_

shapeCase_

int shapeCase_

Class biopb.image.RoiAnnotation

class RoiAnnotation extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

bitField0_

int bitField0_

createdAtUnixMs_

long createdAtUnixMs_

drawnAgainstVersion_

com.google.protobuf.ByteString drawnAgainstVersion_

label_

Object label_

memoizedIsInitialized

byte memoizedIsInitialized

plane_

com.google.protobuf.MapField<Integer,Integer> plane_

propsJson_

Object propsJson_

rev_

long rev_

roi_

ROI roi_

roiId_

Object roiId_

setName_

Object setName_

updatedAtUnixMs_

long updatedAtUnixMs_

Class biopb.image.RoiConflict

class RoiConflict extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

roiId_

Object roiId_

storedRev_

long storedRev_

Class biopb.image.RoiDeleteResult

class RoiDeleteResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

deleted_

com.google.protobuf.LazyStringArrayList deleted_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.image.RoiListResult

class RoiListResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

rois_

List<RoiAnnotation> rois_

sets_

List<RoiSetInfo> sets_

truncated_

boolean truncated_

Class biopb.image.RoiPruneRequest

class RoiPruneRequest extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

apply_

boolean apply_

memoizedIsInitialized

byte memoizedIsInitialized

unseenDays_

int unseenDays_

Class biopb.image.RoiPruneResult

class RoiPruneResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

deleted_

int deleted_

memoizedIsInitialized

byte memoizedIsInitialized

unseen_

List<RoiUnseen> unseen_

Class biopb.image.RoiPutResult

class RoiPutResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

conflicts_

List<RoiConflict> conflicts_

memoizedIsInitialized

byte memoizedIsInitialized

stored_

List<RoiAnnotation> stored_

Class biopb.image.RoiSetInfo

class RoiSetInfo extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

count_

long count_

memoizedIsInitialized

byte memoizedIsInitialized

reserved_

boolean reserved_

setName_

Object setName_

Class biopb.image.RoiUnseen

class RoiUnseen extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

count_

long count_

lastSeenAtUnixMs_

long lastSeenAtUnixMs_

memoizedIsInitialized

byte memoizedIsInitialized

sourceUrl_

Object sourceUrl_

Class biopb.image.Tensor

class Tensor extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bindata_

BinData bindata_

bitField0_

int bitField0_

dimLabels_

com.google.protobuf.LazyStringArrayList dimLabels_

dims_

com.google.protobuf.Internal.IntList dims_

dimsMemoizedSerializedSize

int dimsMemoizedSerializedSize

dtype_

Object dtype_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.image.TensorArg

class TensorArg extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

axes_

Object axes_

mapped_

boolean mapped_

memoizedIsInitialized

byte memoizedIsInitialized

Package biopb.tensor

Class biopb.tensor.AddSourceFailure

class AddSourceFailure extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

path_

Object path_

reason_

Object reason_

Class biopb.tensor.AddSourceProgress

class AddSourceProgress extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

addedCount_

int addedCount_

currentPath_

Object currentPath_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.tensor.AddSourceRequest

class AddSourceRequest extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

sourceType_

Object sourceType_

url_

Object url_

Class biopb.tensor.AddSourceResult

class AddSourceResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

added_

com.google.protobuf.LazyStringArrayList added_

alreadyPresent_

com.google.protobuf.LazyStringArrayList alreadyPresent_

failed_

List<AddSourceFailure> failed_

memoizedIsInitialized

byte memoizedIsInitialized

refreshed_

com.google.protobuf.LazyStringArrayList refreshed_

removed_

com.google.protobuf.LazyStringArrayList removed_

Class biopb.tensor.AddSourceStreamMessage

class AddSourceStreamMessage extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

payload_

Object payload_

payloadCase_

int payloadCase_

Class biopb.tensor.CatalogQuery

class CatalogQuery extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

sql_

Object sql_

Class biopb.tensor.ChunkBounds

class ChunkBounds extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

start_

com.google.protobuf.Internal.LongList start_

startMemoizedSerializedSize

int startMemoizedSerializedSize

stop_

com.google.protobuf.Internal.LongList stop_

stopMemoizedSerializedSize

int stopMemoizedSerializedSize

Class biopb.tensor.DataSourceDescriptor

class DataSourceDescriptor extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bitField0_

int bitField0_

dataResident_

boolean dataResident_

memoizedIsInitialized

byte memoizedIsInitialized

metadataJson_

Object metadataJson_

sourceId_

Object sourceId_

sourceType_

Object sourceType_

sourceUrl_

Object sourceUrl_

tensors_

List<TensorDescriptor> tensors_

Class biopb.tensor.FlightRequest

class FlightRequest extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

request_

Object request_

requestCase_

int requestCase_

Exception biopb.tensor.InvalidTensorRequestException

class InvalidTensorRequestException extends TensorFlightException implements Serializable

Class biopb.tensor.PutCommand

class PutCommand extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

command_

Object command_

commandCase_

int commandCase_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.tensor.PyramidLevel

class PyramidLevel extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

native_

boolean native_

reductionMethod_

Object reductionMethod_

scaleHint_

com.google.protobuf.Internal.LongList scaleHint_

scaleHintMemoizedSerializedSize

int scaleHintMemoizedSerializedSize

shape_

com.google.protobuf.Internal.LongList shape_

shapeMemoizedSerializedSize

int shapeMemoizedSerializedSize

Class biopb.tensor.RemoveSourceRequest

class RemoveSourceRequest extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

rootUrl_

Object rootUrl_

Class biopb.tensor.RemoveSourceResult

class RemoveSourceResult extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

failed_

List<AddSourceFailure> failed_

memoizedIsInitialized

byte memoizedIsInitialized

removed_

com.google.protobuf.LazyStringArrayList removed_

Class biopb.tensor.ResolveProgress

class ResolveProgress extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

elapsedSeconds_

double elapsedSeconds_

memoizedIsInitialized

byte memoizedIsInitialized

targetBytes_

long targetBytes_

targetName_

Object targetName_

Class biopb.tensor.ResolveStreamMessage

class ResolveStreamMessage extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

payload_

Object payload_

payloadCase_

int payloadCase_

Class biopb.tensor.RoiDelete

class RoiDelete extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

memoizedIsInitialized

byte memoizedIsInitialized

setName_

Object setName_

Class biopb.tensor.RoiPut

class RoiPut extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

checkRev_

boolean checkRev_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.tensor.RoiRead

class RoiRead extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

memoizedIsInitialized

byte memoizedIsInitialized

setName_

Object setName_

Class biopb.tensor.SerializableTensorImg

class SerializableTensorImg extends Object implements Externalizable

Serialization Methods

readExternal

public void readExternal(ObjectInput input)
                  throws IOException

Deprecated.

Throws:

IOException

writeExternal

public void writeExternal(ObjectOutput output)
                   throws IOException

Deprecated.

Throws:

IOException

Class biopb.tensor.SerializedTensor

class SerializedTensor extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

authToken_

Object authToken_

flightInfo_

com.google.protobuf.ByteString flightInfo_

location_

Object location_

memoizedIsInitialized

byte memoizedIsInitialized

tlsAnchor_

com.google.protobuf.ByteString tlsAnchor_

Class biopb.tensor.SetUploadStatus

class SetUploadStatus extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

memoizedIsInitialized

byte memoizedIsInitialized

reason_

Object reason_

state_

int state_

Class biopb.tensor.SliceHint

class SliceHint extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

start_

com.google.protobuf.Internal.LongList start_

startMemoizedSerializedSize

int startMemoizedSerializedSize

stop_

com.google.protobuf.Internal.LongList stop_

stopMemoizedSerializedSize

int stopMemoizedSerializedSize

Exception biopb.tensor.SourceUnresolvedException

class SourceUnresolvedException extends TensorFlightException implements Serializable

Exception biopb.tensor.StaleReadPlanException

class StaleReadPlanException extends TensorFlightException implements Serializable

Class biopb.tensor.TensorDescriptor

class TensorDescriptor extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

bitField0_

int bitField0_

chunkShape_

com.google.protobuf.Internal.LongList chunkShape_

chunkShapeMemoizedSerializedSize

int chunkShapeMemoizedSerializedSize

contentVersion_

com.google.protobuf.ByteString contentVersion_

dimLabels_

com.google.protobuf.LazyStringArrayList dimLabels_

dtype_

Object dtype_

isResident_

boolean isResident_

memoizedIsInitialized

byte memoizedIsInitialized

metadataJson_

Object metadataJson_

physicalScale_

com.google.protobuf.Internal.DoubleList physicalScale_

physicalScaleMemoizedSerializedSize

int physicalScaleMemoizedSerializedSize

physicalUnit_

com.google.protobuf.LazyStringArrayList physicalUnit_

pyramid_

List<PyramidLevel> pyramid_

reductionMethod_

Object reductionMethod_

scaleHint_

com.google.protobuf.Internal.LongList scaleHint_

scaleHintMemoizedSerializedSize

int scaleHintMemoizedSerializedSize

shape_

com.google.protobuf.Internal.LongList shape_

shapeMemoizedSerializedSize

int shapeMemoizedSerializedSize

sliceHint_

SliceHint sliceHint_

ttlSeconds_

int ttlSeconds_

uploadStatus_

UploadStatus uploadStatus_

Exception biopb.tensor.TensorFlightException

class TensorFlightException extends RuntimeException implements Serializable

Serialized Fields

reason

String reason

statusCode

org.apache.arrow.flight.FlightStatusCode statusCode

Exception biopb.tensor.TensorNotFoundException

class TensorNotFoundException extends TensorFlightException implements Serializable

Exception biopb.tensor.TensorOperationCancelledException

class TensorOperationCancelledException extends RuntimeException implements Serializable

Serialized Fields

operation

String operation

sourceId

String sourceId

Class biopb.tensor.TensorReadOption

class TensorReadOption extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

arrayId_

Object arrayId_

bitField0_

int bitField0_

fields_

com.google.protobuf.FieldMask fields_

memoizedIsInitialized

byte memoizedIsInitialized

reductionMethod_

Object reductionMethod_

scaleHint_

com.google.protobuf.Internal.LongList scaleHint_

scaleHintMemoizedSerializedSize

int scaleHintMemoizedSerializedSize

sliceHint_

SliceHint sliceHint_

Class biopb.tensor.TensorTicket

class TensorTicket extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

payload_

Object payload_

payloadCase_

int payloadCase_

Exception biopb.tensor.UploadRefusedException

class UploadRefusedException extends TensorFlightException implements Serializable

Serialized Fields

detail

String detail

sourceId

String sourceId

state

String state

Class biopb.tensor.UploadStatus

class UploadStatus extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

expectedChunks_

long expectedChunks_

memoizedIsInitialized

byte memoizedIsInitialized

reason_

Object reason_

state_

int state_

uploadedChunks_

long uploadedChunks_

Class biopb.tensor.WarmProgress

class WarmProgress extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

bytesDone_

long bytesDone_

bytesTotal_

long bytesTotal_

currentName_

Object currentName_

elapsedSeconds_

double elapsedSeconds_

filesDone_

int filesDone_

filesTotal_

int filesTotal_

memoizedIsInitialized

byte memoizedIsInitialized

Class biopb.tensor.WarmStreamMessage

class WarmStreamMessage extends com.google.protobuf.GeneratedMessageV3 implements Serializable

serialVersionUID:

0L

Serialized Fields

memoizedIsInitialized

byte memoizedIsInitialized

payload_

Object payload_

payloadCase_

int payloadCase_